documentation:input:taxonomy
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documentation:input:taxonomy [2013/07/17 13:22] kmartinez_nhm [Editing an existing taxon] |
documentation:input:taxonomy [2014/03/18 13:00] (current) armin_loeckher |
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| **__Recommendation:__** \\ \\ | **__Recommendation:__** \\ \\ | ||
| - | === Adding annotation slips === | + | === Adding annotation labels === |
| - | If your specimen is the type for a later synonymised name, and the accepted name does not appear on the herbarium sheet, you will need to add an annotation slip. Here you should include: (1) the information source (e.g. "fide TROPICOS" or "fide R. Govaerts & al. 2008. World checklist of Myrtaceae"); (2) the accepted name (e.g. ≡ //Picea abies// or = //Picea abies//, depending on whether the names are homotypic or heterotypic synonyms, respectively); and (3) the name and affiliation of the reviser, and the revision date (e. g. "annot. P. Escobar García (W) 2013-06"). \\ | + | If your specimen is the type for a later synonymized name, and the accepted name does not appear on the herbarium sheet, you will need to add an annotation label. Here you should include: (1) the information source (e.g. "fide TROPICOS" or "fide R. Govaerts & al. 2008. World checklist of Myrtaceae"); (2) the accepted name (e.g. ≡ //Picea abies// or = //Picea abies//, depending on whether the names are homotypic or heterotypic synonyms, respectively); and (3) the name and affiliation of the reviser, and the revision date (e. g. "annot. P. Escobar García (W) 2013-06"). \\ |
| - | > Note: Only add an annotation slip for information that is completely different to that given on herbarium sheet such as: type status, basionym, accepted name, author(s). If there is only a slight divergence i.e. a missing "ex …" in the authorship there is no need for annotations). | + | > Note: Only add an annotation label for information that is completely different to that given on the herbarium sheet such as: type status, basionym, accepted name, author(s). If there is only a slight divergence i.e. a missing "ex …" in the authorship there is no need for a new label). |
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| Open a new **edit Species** form, enter the genus name (for example //Potamogeton//) and choose **Genus** in the **Rank** field. Then choose **x** in the **tax. Status** field. Then click **Insert**. This makes the field **tax. Status** change into **parents**. By clicking on the **parents** button, you can enter the parental species. Save changes by clicking **Insert** when finished. The hybrid formula will appear on top line of the **edit Species** page, besides the taxonID and change the **Rank** field to **species**. \\ | Open a new **edit Species** form, enter the genus name (for example //Potamogeton//) and choose **Genus** in the **Rank** field. Then choose **x** in the **tax. Status** field. Then click **Insert**. This makes the field **tax. Status** change into **parents**. By clicking on the **parents** button, you can enter the parental species. Save changes by clicking **Insert** when finished. The hybrid formula will appear on top line of the **edit Species** page, besides the taxonID and change the **Rank** field to **species**. \\ | ||
| - | {{ https://docs.google.com/drawings/d/1mKnebC_PfsEVNxTf_YjH_ksUzJF9GBp0ZxBWXNywt6Y/pub?w=856&h=675&.png?856x675 | nomenclature 35}} | + | {{ https://docs.google.com/drawings/d/1mKnebC_PfsEVNxTf_YjH_ksUzJF9GBp0ZxBWXNywt6Y/pub?w=856&h=675&.png?856x675 | nomenclature 35 "Because **** you thats why":oP }} |
| Hybrid formulas appear only as a genus name in the drop-down lists of the **accepted Taxon** or **Basionym** fields (each with its own ID number). To search for hybrid formulas go to the **list Species** form, input the relevant genus name and select **x** in **Status**. \\ | Hybrid formulas appear only as a genus name in the drop-down lists of the **accepted Taxon** or **Basionym** fields (each with its own ID number). To search for hybrid formulas go to the **list Species** form, input the relevant genus name and select **x** in **Status**. \\ | ||
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| === Taxonomy === | === Taxonomy === | ||
| + | * [[http://www.anbg.gov.au/cgi-bin/apni|APNI]]: The Australian Plant Name Index of Australian Plant Census (CHAH). | ||
| + | * [[http://ww2.bgbm.org/EuroPlusMed/query.asp|Euro+Med]]: Taxonomic and floristic information from the Flora Europaea and Med-Checklist areas. | ||
| + | * [[http://http://www.ildis.org/|ILDIS]]: The International Legume Database & Information Service. | ||
| + | * [[http://botany.si.edu/ing/|ING]]: The Index Nominum Genericorum, a compilation of generic names published for organisms. | ||
| + | * [[http://www.ipni.org/ipni/plantnamesearchpage.do|IPNI]]: The International Plant Names Index, a database of names and associated basic bibliographical details. | ||
| * [[http://www.theplantlist.org/|The Plant List]]: Kew’s working list of all known vascular plants. | * [[http://www.theplantlist.org/|The Plant List]]: Kew’s working list of all known vascular plants. | ||
| + | * [[http://http://compositae.landcareresearch.co.nz/|TICA]]: The Global Compositae Checklist. | ||
| * [[http://www.tropicos.org/|TROPICOS]]: Missouri Botanical Garden’s database of nomenclature, bibliography and specimens. | * [[http://www.tropicos.org/|TROPICOS]]: Missouri Botanical Garden’s database of nomenclature, bibliography and specimens. | ||
| - | * [[http://www.ipni.org/ipni/plantnamesearchpage.do|IPNI]]: The International Plant Names Index, a database of names and associated basic bibliographical details. | ||
| * [[http://apps.kew.org/wcsp/home.do|WCSP]]: The World Checklist of Selected Plant Families. | * [[http://apps.kew.org/wcsp/home.do|WCSP]]: The World Checklist of Selected Plant Families. | ||
| - | * [[http://ww2.bgbm.org/EuroPlusMed/query.asp|Euro+Med]]: Taxonomic and floristic information from the Flora Europaea and Med-Checklist areas. | ||
| - | * [[http://http://compositae.landcareresearch.co.nz/|TICA]]: The Global Compositae Checklist. | ||
| - | * [[http://http://www.ildis.org/|ILDIS]]: The International Legume Database & Information Service. | ||
| - | * [[http://botany.si.edu/ing/|ING]]: The Index Nominum Genericorum, a compilation of generic names published for organisms. | ||
| - | * [[http://www.anbg.gov.au/cgi-bin/apni|APNI]]: The Australian Plant Name Index of Australian Plant Census (CHAH). | ||
| === Literature online === | === Literature online === | ||
| + | * [[http://www.biodiversitylibrary.org/|BHL]]: The Biodiversity Heritage Library. | ||
| + | * [[http://bibdigital.rjb.csic.es/ing/index.php|Biblioteca digital]]: The digital library of the Madrid Botanical Garden. | ||
| * [[http://gallica.bnf.fr/?lang=DE|GALLICA]]: The digital library of the Bibliothèque Nationale de France. | * [[http://gallica.bnf.fr/?lang=DE|GALLICA]]: The digital library of the Bibliothèque Nationale de France. | ||
| + | * [[http://archive.org/details/texts|Internet Archive]]: A non-profit organisation providing a vast permanant digital library. | ||
| * [[http://www.digitale-sammlungen.de/|MDZ]]: The digital library of the Bavarian State Library. | * [[http://www.digitale-sammlungen.de/|MDZ]]: The digital library of the Bavarian State Library. | ||
| - | * [[http://www.biodiversitylibrary.org/|BHL]]: The Biodiversity Heritage Library. | ||
| - | * [[http://bibdigital.rjb.csic.es/ing/index.php|Biblioteca digital]]: The digital library of the Madrid Botanical Garden. | ||
| === Further useful links === | === Further useful links === | ||
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| * [[http://www.iapt-taxon.org/icbn/main.htm| The Appendix III (NOMINA GENERICA CONSERVANDA ET REJICIENDA) of Vienna Code]]. | * [[http://www.iapt-taxon.org/icbn/main.htm| The Appendix III (NOMINA GENERICA CONSERVANDA ET REJICIENDA) of Vienna Code]]. | ||
| - | Pedro's diagram (Google docs) [[https://docs.google.com/drawings/d/1e3ps2m_nZvAe0oa9B_q1ydXrm60WyNJnasCQm7XwnX4/edit|type categories]]. \\ | + | Pedro's diagram (Google docs) [[https://docs.google.com/drawings/d/1e3ps2m_nZvAe0oa9B_q1ydXrm60WyNJnasCQm7XwnX4/edit?usp=sharing|type categories]]. \\ |
| - | Karen´s diagram (Google docs)[[https://docs.google.com/drawings/d/1oWqASw_DmBt3zcUisGl2gPVRhErh1l_WzAeJ4_nkH1s/edit|specimen typification]]. \\ | + | Karen´s diagram (Google docs)[[https://docs.google.com/drawings/d/1oWqASw_DmBt3zcUisGl2gPVRhErh1l_WzAeJ4_nkH1s/edit?usp=sharing|specimen typification]]. \\ |
| - | Name categories diagram (Google docs) [[https://docs.google.com/drawings/d/10VtnxORj0ALVmSeHMnXPsJYS2abbSCPf2i8a4vkesRQ/edit|Name categories diagram]]. \\ | + | Name categories diagram (Google docs) [[https://docs.google.com/drawings/d/10VtnxORj0ALVmSeHMnXPsJYS2abbSCPf2i8a4vkesRQ/edit?usp=sharing|Name categories diagram]]. \\ |
| - | Captures of name categories diagram (Google docs) [[https://docs.google.com/document/d/1lvuavOx3jp_3oux9wQeKNtHFAPxAuaYejUD3kfCHfxg/edit|Captures of name categories diagram]]. \\ \\ | + | Captures of name categories diagram (Google docs) [[https://docs.google.com/document/d/1lvuavOx3jp_3oux9wQeKNtHFAPxAuaYejUD3kfCHfxg/edit?usp=sharing|Captures of name categories diagram]]. \\ \\ |
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| __**Case 1**__ \\ | __**Case 1**__ \\ | ||
| - | Dealing with a lectotypified taxon consisting of several syntypes which are recently linked to different accepted taxa you might have problems to print labels from those syntypes not linked to the lectotype. The accepted taxon on the printed labels will always be that of the lectotypified specimen independent of the syntypes. \\ | + | Dealing with a lectotypified taxon consisting of several syntypes which are recently linked to different accepted taxa, you may have problems to print labels for the syntypes. The accepted taxon on the printed labels will always be that of the lectotypified specimen independent of the syntypes. \\ |
| - | In such a case you have to change temporarily the accepted taxon on the **edit species** page in **accepted taxon** to be correctly linked to that syntype which you need and is not the lectotype. After safing your changes you can print the labels. | + | In such a case you have to temporarily change the accepted taxon on the **edit species** page in **accepted taxon** to the name which you need to appear on the label. After saving your changes, you can print the labels. |
| - | It is very important not to forget to change back again the name of the accepted taxon to that one of the lectotypified syntype. | + | Remember to change the accepted taxon back to that of the lectotypified syntype. |
| ### mit Beispiel und vermutlich auch screenshots ###### | ### mit Beispiel und vermutlich auch screenshots ###### | ||
documentation/input/taxonomy.1374067361.txt.gz · Last modified: 2013/07/17 13:22 by kmartinez_nhm
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