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documentation:digitization [2014/11/03 11:35]
armin_loeckher [Herbarium W]
documentation:digitization [2018/09/04 05:22] (current)
armin_loeckher [Herbarium W]
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 ===== Institution specific Information ===== ===== Institution specific Information =====
 ==== Herbarium W ==== ==== Herbarium W ====
 +
 This is a work in progress... This is a work in progress...
  
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 \\ \\
 === W: Mamiya-Leaf === === W: Mamiya-Leaf ===
 +
 +Read more about the CaptureOne software [[https://​captureintegration.com/​the-ideal-tethered-setup/​ | here]] and [[https://​captureintegration.com/​capture-one-pro-8-1-tested-approved/​ | here]].
  
 == W: Mamiya-Leaf hardware setup & working environment == == W: Mamiya-Leaf hardware setup & working environment ==
  
-((This is work in progess))+> Note This section ​is work in progess!
  
 > Note: Unlike the Pentacon Setup, the iXR/Credo setup does not need any special light conditions. There is no need to switch off any light or warm up the flashes. > Note: Unlike the Pentacon Setup, the iXR/Credo setup does not need any special light conditions. There is no need to switch off any light or warm up the flashes.
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   * create new session. Session naming conventions are [Date]_01 for morning and [Date]_02 for afternoon, e.g. YYMMDD_01. ​   * create new session. Session naming conventions are [Date]_01 for morning and [Date]_02 for afternoon, e.g. YYMMDD_01. ​
     * the latest session is automatically closed when a new session is started.     * the latest session is automatically closed when a new session is started.
-  * set "​Arbeitsfläche Stand_1"​ (select from Menu: "​Fenster / Arbeitsfläche / Stand_1"​)+  * set "​Arbeitsfläche Stand_1" ​if needed ​(select from Menu: "​Fenster / Arbeitsfläche / Stand_1"​)
   * delete [KameraZähler] from the "​Format"​ panel   * delete [KameraZähler] from the "​Format"​ panel
   * check depth of focus: ​   * check depth of focus: ​
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     * take a picture of the focus wedge     * take a picture of the focus wedge
     * reduce illumination     * reduce illumination
-    * 3,5 marker on the focus wedge must be sharp+    * 2,5 marker on the focus wedge must be sharp
     * set illumination back to 0 and aperture back to 22     * set illumination back to 0 and aperture back to 22
-  * create LCC-Profile (naming convention: YYMMDD, see LCC-profile) ​- once per day! +  * create LCC raw file - once per day! 
-  * set white fader - once per day!+  * set white fader
   * take pictures   * take pictures
   * end the session: ​   * end the session: ​
     * check whether all names fit the file naming convention     * check whether all names fit the file naming convention
     * select all pictures of the session in the CaptureOne software     * select all pictures of the session in the CaptureOne software
-    * set "​LCC" ​to the day'​s ​preset ​and "​Schärfe"​ and "​Klarheit"​ to the "​Stand_01"​ default. Be aware that if many pictures were taken, the LCC preset and the defaults may take a few seconds to highlight in orange.+    * set "​LCC" ​using the day'​s ​LCC raw file and set "​Schärfe"​ and "​Klarheit"​ to the "​Stand_01"​ default. Be aware that if many pictures were taken, the LCC preset and the defaults may take a few seconds to highlight in orange.
     * develop pictures as desired (siehe developing)     * develop pictures as desired (siehe developing)
  
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       * Switch of power line for 20 seconds. After turning on the power again you should see a flash and the green status light on the camera should be on (not blinking). Release from the CaptureOne software should now be possible.       * Switch of power line for 20 seconds. After turning on the power again you should see a flash and the green status light on the camera should be on (not blinking). Release from the CaptureOne software should now be possible.
  
-4) Depth of focus check:+4) Checking the depth of focus:
  
 > Note: please do this only if the picture is not sharp! > Note: please do this only if the picture is not sharp!
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   * set aperture to 4   * set aperture to 4
   * turn on live feed (camera symbol)   * turn on live feed (camera symbol)
-  * turn the focussing ring of the camera lens till the 3,5 marking on the focus wedge is sharp and clear. Be aware of the short delay between live feed and actual movement.+  * turn the focussing ring of the camera lens till the 2,5 marking on the focus wedge is sharp and clear. Be aware of the short delay between live feed and actual movement.
   * set aperture back to 22   * set aperture back to 22
-  * take a picture and check the result+  * take a picture, name it "​Schärfe_(date)" ​and check the result 
 +  * close the CaptureOne Software. (Note: This is mandatory! using the live feed may cause problems otherwise.) 
 +  * wait for 10 seconds 
 +  * restart the CaptureOne Software 
 +    * If you can not take photos after restarting the program, shut down the computer and the power supply and restart the whole system.
  
-6) LCC profile 
  
-> Note: this step has to be taken every day! +5) Creating the LCC raw file 
 + 
 +> Note: this step has to be taken every day! 
 > Note: this has to be done BEFORE any pictures are taken and WITHOUT any specimens on the table. > Note: this has to be done BEFORE any pictures are taken and WITHOUT any specimens on the table.
  
   * set flash to 10 (on both devices).   * set flash to 10 (on both devices).
-  * place the oplaine disk in front of the camera lens and take a picture. +  * place the oplaine disk in front of the camera lenstake a picture ​and name it "​LCC_(date)"​ 
-  * select ​from menu: "​Objektiv"​ - "​LCC"​ - "LCC erstellen" ​- tick both boxes - click "​Erstelle"​ - wait till everything is processed.+  * select ​the picture, click the right mouse button and select ​"LCC erstellen"​
   * select the pipette tool and use it on the picture to configure the white fader   * select the pipette tool and use it on the picture to configure the white fader
-  ​* save the LCC-profile:​ in menu "​Voreinstellungen"​ click "​Benutzereinstellungen sichern..."​ (Format YYMMDD) +  * set both flash devices back to 9,
-  ​* set both flash devices back to 8,7+  * restart the CaptureOne Software
   * take a photo to reconfigure the flash devices   * take a photo to reconfigure the flash devices
 +    * If you can not take photos after restarting the program, shut down the computer and the power supply and restart the whole system.
  
-7) Taking pictures+6) Taking pictures
  
   * search for the specimen in the database and copy the specimen number   * search for the specimen in the database and copy the specimen number
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   * mark the specimen as processed and put it away   * mark the specimen as processed and put it away
  
-8Development+7End session: 
 + 
 +  * Select all photos except "​Schärfe_(date)"​ and "​LCC_(date)"​ 
 +  * Set "​Schärfe"​ (sharpness) and "​Klarheit"​ (clarity) to "​stand_01"​  
 +  * Select all photos except "​Schärfe_(date)"​ 
 +  * Click the right mouse button and select "LCC zuweisen"​. Wait till the operation has finished - be aware that there is no progress bar! 
 + 
 +If this is not the first session of the day you have to import the LCC-RAW-File:​ 
 +  * Close the CaptureOne Software 
 +  * Open the capture folder of first session of the day in Windows explorer and copy/paste "​LCC_(date)"​ to the capture folder of your current session. 
 +  * Reopen the CaptureOne Software. The "​LCC_(date)"​ picture should now be available. 
 +  * Select the "​LCC_(date)"​ picture, click the right mouse button and select "LCC erstellen"​. 
 +  * Select all photos except "​Schärfe_(date)"​ 
 +  * Click the right mouse button and select "LCC zuweisen"​. Wait till the operation has finished - be aware that there is no progress bar!
  
 > Note: Activate from menu "​Stapelverarbeitung"​ (upper left)! > Note: Activate from menu "​Stapelverarbeitung"​ (upper left)!
  
 +  * Select all photos except "​Schärfe_(date)"​ and "​LCC_(date)"​
   * click "​Ausgabe"​ (cogwheel symbol) and check the settings:   * click "​Ausgabe"​ (cogwheel symbol) and check the settings:
       * "​Verarbeitungsvorgaben"​ (development settings): Format "​TIFF"​ "​8bit"​       * "​Verarbeitungsvorgaben"​ (development settings): Format "​TIFF"​ "​8bit"​
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   * click "​Verarbeiten"​   * click "​Verarbeiten"​
   * wait (up to 10 sec per photo) - the cogwheel symbols on th pictures change their color from orange to gray.   * wait (up to 10 sec per photo) - the cogwheel symbols on th pictures change their color from orange to gray.
 +
 +8) Trash files, Jacq-Import & Backup
 +
 +  * Open the session folder in Windows Explorer and open "​trash"​. This folder contains all images deleted in your current session. Delete all unwanted images from this folder. Keep images which show technical errors (color dots etc) and report them to Heimo.
 +  * Open the output folder of your session and copy all images
 +  * Open the jacq-import directory and create a folder for your session. Stick to the naming conventions!
 +  * Paste the images to the newly created folder.
 +  * Compare number and file size of the images with the original folder to make sure everything has been copied correctly
 +  * Convert the original images to EIP format and store them in their respective folder on the backup drive.
  
 9) Screen calibration:​ 9) Screen calibration:​
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   * The lower right buttons turns to "​Finish"​. Click it.   * The lower right buttons turns to "​Finish"​. Click it.
   * The software switches back to start screen, the lower right buttons turns to "​Quit"​.   * The software switches back to start screen, the lower right buttons turns to "​Quit"​.
-  
- ​screen shots  ​ 
  
-  *  
 10) Annotations and troubleshooting 10) Annotations and troubleshooting
  
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       * "​Blende"​ (aperture): 22       * "​Blende"​ (aperture): 22
       * "​Belichtung"​ (illumination):​ 1/125       * "​Belichtung"​ (illumination):​ 1/125
-      * "​Blitz"​ (flash): ​8,7+      * "​Blitz"​ (flash): ​9,1
       * Proof Profil "​AdobeRGB (1998)"​       * Proof Profil "​AdobeRGB (1998)"​
  
documentation/digitization.1415014521.txt.gz · Last modified: 2014/11/03 11:35 by armin_loeckher